Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.42■□□□□ 0.22
Lsm6P62313 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.42■□□□□ 0.22
Lsm6P62313 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.42■□□□□ 0.22
Lsm6P62313 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Lsm6P62313 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Lsm6P62313 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm6P62313 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.42■□□□□ 0.22
Lsm6P62313 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm6P62313 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm13146-201ENSMUST00000118508 780 ntBASIC16.41■□□□□ 0.22
Lsm6P62313 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.41■□□□□ 0.22
Lsm6P62313 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.41■□□□□ 0.22
Lsm6P62313 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.41■□□□□ 0.22
Lsm6P62313 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm6P62313 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
Lsm6P62313 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm6P62313 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.41■□□□□ 0.22
Lsm6P62313 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm6P62313 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm6P62313 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm6P62313 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Lsm6P62313 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm6P62313 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.4■□□□□ 0.22
Lsm6P62313 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm6P62313 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lsm6P62313 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Reep4-203ENSMUST00000226563 1444 ntBASIC16.39■□□□□ 0.21
Lsm6P62313 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.39■□□□□ 0.21
Lsm6P62313 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lsm6P62313 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lsm6P62313 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lsm6P62313 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Lsm6P62313 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Lsm6P62313 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm6P62313 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.38■□□□□ 0.21
Lsm6P62313 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Lsm6P62313 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm6P62313 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.38■□□□□ 0.21
Lsm6P62313 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm6P62313 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm6P62313 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms