Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.46■□□□□ 0.23
Sec61a1P61620 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a1P61620 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.45■□□□□ 0.22
Sec61a1P61620 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.44■□□□□ 0.22
Sec61a1P61620 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a1P61620 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.43■□□□□ 0.22
Sec61a1P61620 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a1P61620 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sec61a1P61620 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Sec61a1P61620 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sec61a1P61620 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.42■□□□□ 0.22
Sec61a1P61620 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.42■□□□□ 0.22
Sec61a1P61620 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a1P61620 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sec61a1P61620 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms