Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NrlP54846 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.97■□□□□ 0.79
NrlP54846 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Gm27275-201ENSMUST00000184318 272 ntBASIC19.97■□□□□ 0.79
NrlP54846 Mir7071-201ENSMUST00000184847 69 ntBASIC19.97■□□□□ 0.79
NrlP54846 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NrlP54846 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NrlP54846 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NrlP54846 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NrlP54846 Gm12896-201ENSMUST00000118430 226 ntBASIC19.96■□□□□ 0.79
NrlP54846 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.96■□□□□ 0.79
NrlP54846 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NrlP54846 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NrlP54846 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NrlP54846 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NrlP54846 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NrlP54846 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.95■□□□□ 0.78
NrlP54846 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NrlP54846 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NrlP54846 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.94■□□□□ 0.78
NrlP54846 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NrlP54846 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.93■□□□□ 0.78
NrlP54846 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.93■□□□□ 0.78
NrlP54846 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NrlP54846 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Mir6982-201ENSMUST00000184354 68 ntBASIC19.92■□□□□ 0.78
NrlP54846 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NrlP54846 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NrlP54846 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.91■□□□□ 0.78
NrlP54846 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NrlP54846 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NrlP54846 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.91■□□□□ 0.78
NrlP54846 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.91■□□□□ 0.78
NrlP54846 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NrlP54846 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
NrlP54846 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NrlP54846 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Gm5643-201ENSMUST00000117081 966 ntBASIC19.9■□□□□ 0.78
NrlP54846 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Gm2559-201ENSMUST00000201323 363 ntBASIC19.9■□□□□ 0.78
NrlP54846 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NrlP54846 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NrlP54846 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NrlP54846 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
NrlP54846 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NrlP54846 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NrlP54846 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.89■□□□□ 0.77
NrlP54846 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms