Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RoraP51448 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RoraP51448 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.69■□□□□ 0.42
RoraP51448 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RoraP51448 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RoraP51448 Gm12527-201ENSMUST00000117967 564 ntBASIC17.69■□□□□ 0.42
RoraP51448 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.69■□□□□ 0.42
RoraP51448 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.69■□□□□ 0.42
RoraP51448 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RoraP51448 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RoraP51448 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RoraP51448 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RoraP51448 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RoraP51448 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.68■□□□□ 0.42
RoraP51448 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.68■□□□□ 0.42
RoraP51448 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.68■□□□□ 0.42
RoraP51448 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RoraP51448 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RoraP51448 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RoraP51448 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RoraP51448 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RoraP51448 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RoraP51448 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.67■□□□□ 0.42
RoraP51448 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RoraP51448 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RoraP51448 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RoraP51448 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RoraP51448 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RoraP51448 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RoraP51448 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.66■□□□□ 0.42
RoraP51448 Gm26524-201ENSMUST00000192339 390 ntBASIC17.66■□□□□ 0.42
RoraP51448 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RoraP51448 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RoraP51448 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RoraP51448 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.65■□□□□ 0.42
RoraP51448 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.65■□□□□ 0.42
RoraP51448 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RoraP51448 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RoraP51448 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RoraP51448 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RoraP51448 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.41
RoraP51448 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.64■□□□□ 0.41
RoraP51448 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RoraP51448 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RoraP51448 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RoraP51448 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RoraP51448 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RoraP51448 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.63■□□□□ 0.41
RoraP51448 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.63■□□□□ 0.41
RoraP51448 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RoraP51448 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
RoraP51448 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.62■□□□□ 0.41
RoraP51448 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Gm20049-201ENSMUST00000219950 730 ntBASIC17.62■□□□□ 0.41
RoraP51448 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RoraP51448 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RoraP51448 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RoraP51448 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms