Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps4bP46467 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps4bP46467 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.99■□□□□ 0.63
Vps4bP46467 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps4bP46467 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps4bP46467 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps4bP46467 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.98■□□□□ 0.63
Vps4bP46467 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.98■□□□□ 0.63
Vps4bP46467 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vps4bP46467 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps4bP46467 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
Vps4bP46467 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps4bP46467 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps4bP46467 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps4bP46467 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps4bP46467 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps4bP46467 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps4bP46467 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Vps4bP46467 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps4bP46467 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.96■□□□□ 0.63
Vps4bP46467 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps4bP46467 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Vps4bP46467 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps4bP46467 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps4bP46467 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps4bP46467 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps4bP46467 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.95■□□□□ 0.62
Vps4bP46467 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Vps4bP46467 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps4bP46467 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps4bP46467 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.94■□□□□ 0.62
Vps4bP46467 Gm6139-201ENSMUST00000079261 882 ntBASIC18.94■□□□□ 0.62
Vps4bP46467 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps4bP46467 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.93■□□□□ 0.62
Vps4bP46467 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.93■□□□□ 0.62
Vps4bP46467 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps4bP46467 Gm26833-201ENSMUST00000180899 440 ntBASIC18.93■□□□□ 0.62
Vps4bP46467 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps4bP46467 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps4bP46467 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.93■□□□□ 0.62
Vps4bP46467 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms