Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sdc2P43407 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Sdc2P43407 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21■□□□□ 0.95
Sdc2P43407 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sdc2P43407 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sdc2P43407 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sdc2P43407 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.99■□□□□ 0.95
Sdc2P43407 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Sdc2P43407 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.99■□□□□ 0.95
Sdc2P43407 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Sdc2P43407 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sdc2P43407 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Gm45417-201ENSMUST00000209533 758 ntBASIC20.99■□□□□ 0.95
Sdc2P43407 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.99■□□□□ 0.95
Sdc2P43407 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sdc2P43407 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc2P43407 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.98■□□□□ 0.95
Sdc2P43407 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sdc2P43407 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sdc2P43407 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Gm40848-201ENSMUST00000221998 324 ntBASIC20.98■□□□□ 0.95
Sdc2P43407 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.98■□□□□ 0.95
Sdc2P43407 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc2P43407 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.97■□□□□ 0.95
Sdc2P43407 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.97■□□□□ 0.95
Sdc2P43407 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sdc2P43407 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc2P43407 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sdc2P43407 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.96■□□□□ 0.95
Sdc2P43407 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Sdc2P43407 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc2P43407 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Gm26833-201ENSMUST00000180899 440 ntBASIC20.95■□□□□ 0.94
Sdc2P43407 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sdc2P43407 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc2P43407 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Sdc2P43407 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Sdc2P43407 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms