Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HttP42859 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.36■□□□□ 0.85
HttP42859 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HttP42859 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HttP42859 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HttP42859 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HttP42859 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HttP42859 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.35■□□□□ 0.85
HttP42859 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HttP42859 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.34■□□□□ 0.85
HttP42859 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HttP42859 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HttP42859 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.34■□□□□ 0.85
HttP42859 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HttP42859 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HttP42859 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.33■□□□□ 0.85
HttP42859 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HttP42859 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HttP42859 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HttP42859 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HttP42859 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HttP42859 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HttP42859 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HttP42859 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HttP42859 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.32■□□□□ 0.84
HttP42859 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HttP42859 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.32■□□□□ 0.84
HttP42859 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HttP42859 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
HttP42859 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HttP42859 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HttP42859 Gm14859-201ENSMUST00000117752 357 ntBASIC20.31■□□□□ 0.84
HttP42859 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HttP42859 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HttP42859 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.31■□□□□ 0.84
HttP42859 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HttP42859 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HttP42859 Gm18959-201ENSMUST00000208954 655 ntBASIC20.31■□□□□ 0.84
HttP42859 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HttP42859 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.3■□□□□ 0.84
HttP42859 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.3■□□□□ 0.84
HttP42859 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HttP42859 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HttP42859 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.29■□□□□ 0.84
HttP42859 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Timm23-208ENSMUST00000226683 750 ntBASIC20.29■□□□□ 0.84
HttP42859 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HttP42859 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.29■□□□□ 0.84
HttP42859 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.29■□□□□ 0.84
HttP42859 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HttP42859 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HttP42859 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HttP42859 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HttP42859 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HttP42859 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.27■□□□□ 0.84
HttP42859 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.27■□□□□ 0.84
HttP42859 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HttP42859 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HttP42859 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.27■□□□□ 0.83
HttP42859 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.26■□□□□ 0.83
HttP42859 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HttP42859 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HttP42859 Gm28033-201ENSMUST00000184224 96 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms