Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.56■□□□□ 0.56
Cd9P40240 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.56■□□□□ 0.56
Cd9P40240 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.56■□□□□ 0.56
Cd9P40240 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.56■□□□□ 0.56
Cd9P40240 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd9P40240 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd9P40240 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd9P40240 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.55■□□□□ 0.56
Cd9P40240 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cd9P40240 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cd9P40240 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cd9P40240 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd9P40240 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Cd9P40240 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.54■□□□□ 0.56
Cd9P40240 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.54■□□□□ 0.56
Cd9P40240 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd9P40240 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.53■□□□□ 0.56
Cd9P40240 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.53■□□□□ 0.56
Cd9P40240 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Cd9P40240 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd9P40240 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cd9P40240 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cd9P40240 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cd9P40240 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.52■□□□□ 0.56
Cd9P40240 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
Cd9P40240 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.52■□□□□ 0.56
Cd9P40240 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.52■□□□□ 0.56
Cd9P40240 Gm42778-201ENSMUST00000199644 553 ntBASIC18.52■□□□□ 0.56
Cd9P40240 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.52■□□□□ 0.56
Cd9P40240 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd9P40240 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd9P40240 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cd9P40240 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.52■□□□□ 0.55
Cd9P40240 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.51■□□□□ 0.55
Cd9P40240 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Gm10033-202ENSMUST00000211874 928 ntBASIC18.51■□□□□ 0.55
Cd9P40240 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cd9P40240 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd9P40240 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd9P40240 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd9P40240 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cd9P40240 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd9P40240 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.5■□□□□ 0.55
Cd9P40240 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cd9P40240 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.49■□□□□ 0.55
Cd9P40240 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd9P40240 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms