Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cxcl12P40224 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Cxcl12P40224 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.44■□□□□ 0.7
Cxcl12P40224 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Gm27741-201ENSMUST00000185060 237 ntBASIC19.44■□□□□ 0.7
Cxcl12P40224 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cxcl12P40224 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Gm13559-201ENSMUST00000120476 863 ntBASIC19.43■□□□□ 0.7
Cxcl12P40224 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cxcl12P40224 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.43■□□□□ 0.7
Cxcl12P40224 Gm43183-201ENSMUST00000200632 547 ntBASIC19.43■□□□□ 0.7
Cxcl12P40224 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.43■□□□□ 0.7
Cxcl12P40224 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.43■□□□□ 0.7
Cxcl12P40224 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.43■□□□□ 0.7
Cxcl12P40224 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cxcl12P40224 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
Cxcl12P40224 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cxcl12P40224 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cxcl12P40224 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl12P40224 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl12P40224 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.41■□□□□ 0.7
Cxcl12P40224 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.41■□□□□ 0.7
Cxcl12P40224 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl12P40224 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cxcl12P40224 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.41■□□□□ 0.7
Cxcl12P40224 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.4■□□□□ 0.7
Cxcl12P40224 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cxcl12P40224 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cxcl12P40224 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.4■□□□□ 0.7
Cxcl12P40224 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.4■□□□□ 0.7
Cxcl12P40224 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cxcl12P40224 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cxcl12P40224 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cxcl12P40224 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.39■□□□□ 0.69
Cxcl12P40224 Gm11539-201ENSMUST00000119837 557 ntBASIC19.39■□□□□ 0.69
Cxcl12P40224 Gm13436-201ENSMUST00000120418 567 ntBASIC19.39■□□□□ 0.69
Cxcl12P40224 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cxcl12P40224 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cxcl12P40224 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cxcl12P40224 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcl12P40224 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcl12P40224 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cxcl12P40224 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcl12P40224 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.38■□□□□ 0.69
Cxcl12P40224 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cxcl12P40224 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
Cxcl12P40224 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cxcl12P40224 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.37■□□□□ 0.69
Cxcl12P40224 Gm7889-201ENSMUST00000185591 958 ntBASIC19.37■□□□□ 0.69
Cxcl12P40224 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cxcl12P40224 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cxcl12P40224 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cxcl12P40224 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms