Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.82■□□□□ 0.6
Fen1P39749 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.82■□□□□ 0.6
Fen1P39749 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fen1P39749 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Fen1P39749 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fen1P39749 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Fen1P39749 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Fen1P39749 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fen1P39749 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Fen1P39749 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.8■□□□□ 0.6
Fen1P39749 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.8■□□□□ 0.6
Fen1P39749 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fen1P39749 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.8■□□□□ 0.6
Fen1P39749 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Fen1P39749 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.79■□□□□ 0.6
Fen1P39749 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Fen1P39749 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Gm13241-201ENSMUST00000094493 780 ntBASIC18.79■□□□□ 0.6
Fen1P39749 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.79■□□□□ 0.6
Fen1P39749 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fen1P39749 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Fen1P39749 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fen1P39749 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.78■□□□□ 0.6
Fen1P39749 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Fen1P39749 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
Fen1P39749 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.78■□□□□ 0.6
Fen1P39749 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fen1P39749 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.78■□□□□ 0.6
Fen1P39749 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
Fen1P39749 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fen1P39749 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fen1P39749 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fen1P39749 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fen1P39749 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Gm9847-201ENSMUST00000052528 599 ntBASIC18.76■□□□□ 0.59
Fen1P39749 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Fen1P39749 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.76■□□□□ 0.59
Fen1P39749 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Fen1P39749 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Fen1P39749 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fen1P39749 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.76■□□□□ 0.59
Fen1P39749 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fen1P39749 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fen1P39749 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fen1P39749 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fen1P39749 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms