Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.61■□□□□ 0.57
LdlrP35951 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Gm26833-201ENSMUST00000180899 440 ntBASIC18.61■□□□□ 0.57
LdlrP35951 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.61■□□□□ 0.57
LdlrP35951 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.61■□□□□ 0.57
LdlrP35951 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LdlrP35951 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
LdlrP35951 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LdlrP35951 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
LdlrP35951 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.6■□□□□ 0.57
LdlrP35951 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.6■□□□□ 0.57
LdlrP35951 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.6■□□□□ 0.57
LdlrP35951 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LdlrP35951 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LdlrP35951 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LdlrP35951 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.59■□□□□ 0.57
LdlrP35951 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LdlrP35951 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.59■□□□□ 0.57
LdlrP35951 Gm42569-201ENSMUST00000200539 472 ntBASIC18.59■□□□□ 0.57
LdlrP35951 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LdlrP35951 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LdlrP35951 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LdlrP35951 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LdlrP35951 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LdlrP35951 Gm43060-201ENSMUST00000200621 289 ntBASIC18.58■□□□□ 0.56
LdlrP35951 Spcs1-204ENSMUST00000226782 949 ntBASIC18.58■□□□□ 0.56
LdlrP35951 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LdlrP35951 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
LdlrP35951 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
LdlrP35951 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LdlrP35951 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LdlrP35951 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.58■□□□□ 0.56
LdlrP35951 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LdlrP35951 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LdlrP35951 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
LdlrP35951 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
LdlrP35951 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LdlrP35951 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.56■□□□□ 0.56
LdlrP35951 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LdlrP35951 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LdlrP35951 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.55■□□□□ 0.56
LdlrP35951 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.55■□□□□ 0.56
LdlrP35951 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LdlrP35951 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.55■□□□□ 0.56
LdlrP35951 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LdlrP35951 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms