Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp13P33435 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.15■□□□□ 0.66
Mmp13P33435 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mmp13P33435 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Mmp13P33435 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Mmp13P33435 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Mmp13P33435 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp13P33435 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp13P33435 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.14■□□□□ 0.66
Mmp13P33435 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp13P33435 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp13P33435 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.14■□□□□ 0.65
Mmp13P33435 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp13P33435 Rarb-207ENSMUST00000225921 2756 ntBASIC19.14■□□□□ 0.65
Mmp13P33435 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Mmp13P33435 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp13P33435 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp13P33435 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp13P33435 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp13P33435 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp13P33435 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp13P33435 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Mmp13P33435 Grk6-206ENSMUST00000224995 2971 ntBASIC19.13■□□□□ 0.65
Mmp13P33435 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp13P33435 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp13P33435 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Mmp13P33435 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp13P33435 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.12■□□□□ 0.65
Mmp13P33435 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.12■□□□□ 0.65
Mmp13P33435 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp13P33435 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Mmp13P33435 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp13P33435 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Mmp13P33435 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp13P33435 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp13P33435 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp13P33435 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp13P33435 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Mmp13P33435 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Mmp13P33435 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.1■□□□□ 0.65
Mmp13P33435 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Mmp13P33435 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.1■□□□□ 0.65
Mmp13P33435 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.1■□□□□ 0.65
Mmp13P33435 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Mmp13P33435 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Mmp13P33435 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Mmp13P33435 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Mmp13P33435 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp13P33435 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Gm18284-201ENSMUST00000172604 624 ntBASIC19.09■□□□□ 0.65
Mmp13P33435 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.09■□□□□ 0.65
Mmp13P33435 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp13P33435 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Mmp13P33435 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp13P33435 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp13P33435 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp13P33435 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp13P33435 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.08■□□□□ 0.64
Mmp13P33435 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms