Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a13P31649 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a13P31649 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.07■□□□□ 0.64
Slc6a13P31649 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Slc6a13P31649 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc6a13P31649 Gm42569-201ENSMUST00000200539 472 ntBASIC19.07■□□□□ 0.64
Slc6a13P31649 Gm7514-201ENSMUST00000209475 934 ntBASIC19.07■□□□□ 0.64
Slc6a13P31649 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.07■□□□□ 0.64
Slc6a13P31649 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.07■□□□□ 0.64
Slc6a13P31649 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a13P31649 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Gm6420-201ENSMUST00000193885 723 ntBASIC19.06■□□□□ 0.64
Slc6a13P31649 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc6a13P31649 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a13P31649 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a13P31649 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a13P31649 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Nespas-201ENSMUST00000143738 1083 ntBASIC19.05■□□□□ 0.64
Slc6a13P31649 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.05■□□□□ 0.64
Slc6a13P31649 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Slc6a13P31649 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a13P31649 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc6a13P31649 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc6a13P31649 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc6a13P31649 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a13P31649 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.04■□□□□ 0.64
Slc6a13P31649 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Slc6a13P31649 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.04■□□□□ 0.64
Slc6a13P31649 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Slc6a13P31649 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Slc6a13P31649 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Slc6a13P31649 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc6a13P31649 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc6a13P31649 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a13P31649 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a13P31649 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a13P31649 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a13P31649 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.02■□□□□ 0.64
Slc6a13P31649 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc6a13P31649 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a13P31649 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a13P31649 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a13P31649 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc6a13P31649 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms