Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 Gm21814-202ENSMUST00000203277 873 ntBASIC18.91■□□□□ 0.62
PdgfbP31240 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.91■□□□□ 0.62
PdgfbP31240 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.91■□□□□ 0.62
PdgfbP31240 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfbP31240 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.91■□□□□ 0.62
PdgfbP31240 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.9■□□□□ 0.62
PdgfbP31240 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Mtag2-201ENSMUST00000058665 714 ntBASIC18.9■□□□□ 0.62
PdgfbP31240 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfbP31240 Flg-201ENSMUST00000050758 1488 ntBASIC18.9■□□□□ 0.62
PdgfbP31240 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.89■□□□□ 0.62
PdgfbP31240 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PdgfbP31240 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PdgfbP31240 Gm13559-201ENSMUST00000120476 863 ntBASIC18.89■□□□□ 0.61
PdgfbP31240 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfbP31240 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.89■□□□□ 0.61
PdgfbP31240 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfbP31240 Gm43183-201ENSMUST00000200632 547 ntBASIC18.89■□□□□ 0.61
PdgfbP31240 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.89■□□□□ 0.61
PdgfbP31240 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.89■□□□□ 0.61
PdgfbP31240 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfbP31240 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PdgfbP31240 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PdgfbP31240 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.88■□□□□ 0.61
PdgfbP31240 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PdgfbP31240 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Gm6659-201ENSMUST00000174752 547 ntBASIC18.88■□□□□ 0.61
PdgfbP31240 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.88■□□□□ 0.61
PdgfbP31240 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.88■□□□□ 0.61
PdgfbP31240 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.88■□□□□ 0.61
PdgfbP31240 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfbP31240 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PdgfbP31240 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.87■□□□□ 0.61
PdgfbP31240 Gm11539-201ENSMUST00000119837 557 ntBASIC18.87■□□□□ 0.61
PdgfbP31240 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PdgfbP31240 Gm13436-201ENSMUST00000120418 567 ntBASIC18.87■□□□□ 0.61
PdgfbP31240 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfbP31240 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfbP31240 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfbP31240 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.87■□□□□ 0.61
PdgfbP31240 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.87■□□□□ 0.61
PdgfbP31240 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PdgfbP31240 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.86■□□□□ 0.61
PdgfbP31240 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.86■□□□□ 0.61
PdgfbP31240 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfbP31240 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PdgfbP31240 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PdgfbP31240 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PdgfbP31240 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.85■□□□□ 0.61
PdgfbP31240 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PdgfbP31240 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.85■□□□□ 0.61
PdgfbP31240 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfbP31240 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PdgfbP31240 Gm7889-201ENSMUST00000185591 958 ntBASIC18.84■□□□□ 0.61
PdgfbP31240 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.84■□□□□ 0.61
PdgfbP31240 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.84■□□□□ 0.61
PdgfbP31240 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PdgfbP31240 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfbP31240 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfbP31240 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfbP31240 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfbP31240 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms