Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.24■□□□□ 0.67
Nfkb1P25799 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Gm20760-201ENSMUST00000179197 648 ntBASIC19.24■□□□□ 0.67
Nfkb1P25799 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Rab3c-203ENSMUST00000224180 967 ntBASIC19.24■□□□□ 0.67
Nfkb1P25799 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nfkb1P25799 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.24■□□□□ 0.67
Nfkb1P25799 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nfkb1P25799 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nfkb1P25799 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nfkb1P25799 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nfkb1P25799 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nfkb1P25799 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.23■□□□□ 0.67
Nfkb1P25799 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.23■□□□□ 0.67
Nfkb1P25799 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nfkb1P25799 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nfkb1P25799 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nfkb1P25799 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nfkb1P25799 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nfkb1P25799 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nfkb1P25799 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nfkb1P25799 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nfkb1P25799 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nfkb1P25799 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.21■□□□□ 0.67
Nfkb1P25799 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfkb1P25799 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfkb1P25799 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.21■□□□□ 0.67
Nfkb1P25799 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.21■□□□□ 0.67
Nfkb1P25799 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nfkb1P25799 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.21■□□□□ 0.67
Nfkb1P25799 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.21■□□□□ 0.67
Nfkb1P25799 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.21■□□□□ 0.67
Nfkb1P25799 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Nfkb1P25799 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.2■□□□□ 0.66
Nfkb1P25799 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Nfkb1P25799 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nfkb1P25799 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nfkb1P25799 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nfkb1P25799 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Nfkb1P25799 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Nfkb1P25799 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nfkb1P25799 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nfkb1P25799 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.19■□□□□ 0.66
Nfkb1P25799 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nfkb1P25799 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms