Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.8■□□□□ 0.92
RarbP22605 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.8■□□□□ 0.92
RarbP22605 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RarbP22605 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.8■□□□□ 0.92
RarbP22605 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.8■□□□□ 0.92
RarbP22605 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RarbP22605 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Gm2399-201ENSMUST00000104944 225 ntBASIC20.79■□□□□ 0.92
RarbP22605 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RarbP22605 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Gm10698-201ENSMUST00000182663 604 ntBASIC20.79■□□□□ 0.92
RarbP22605 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.79■□□□□ 0.92
RarbP22605 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RarbP22605 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.78■□□□□ 0.92
RarbP22605 Gm15378-201ENSMUST00000121894 207 ntBASIC20.78■□□□□ 0.92
RarbP22605 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.78■□□□□ 0.92
RarbP22605 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RarbP22605 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RarbP22605 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RarbP22605 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.77■□□□□ 0.92
RarbP22605 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RarbP22605 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RarbP22605 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RarbP22605 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.76■□□□□ 0.91
RarbP22605 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.76■□□□□ 0.91
RarbP22605 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.76■□□□□ 0.91
RarbP22605 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RarbP22605 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RarbP22605 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RarbP22605 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RarbP22605 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.75■□□□□ 0.91
RarbP22605 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RarbP22605 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.75■□□□□ 0.91
RarbP22605 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RarbP22605 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
RarbP22605 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RarbP22605 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RarbP22605 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RarbP22605 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RarbP22605 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.74■□□□□ 0.91
RarbP22605 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.74■□□□□ 0.91
RarbP22605 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RarbP22605 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Gm15565-201ENSMUST00000118890 427 ntBASIC20.73■□□□□ 0.91
RarbP22605 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RarbP22605 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RarbP22605 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.73■□□□□ 0.91
RarbP22605 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Notumos-201ENSMUST00000151998 2659 ntBASIC20.73■□□□□ 0.91
RarbP22605 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RarbP22605 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.73■□□□□ 0.91
RarbP22605 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RarbP22605 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RarbP22605 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.72■□□□□ 0.91
RarbP22605 Gm13158-201ENSMUST00000122007 736 ntBASIC20.72■□□□□ 0.91
RarbP22605 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RarbP22605 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.72■□□□□ 0.91
RarbP22605 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms