Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn1P18608 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hmgn1P18608 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.14■□□□□ 0.33
Hmgn1P18608 Golgb1-201ENSMUST00000023534 498 ntBASIC17.14■□□□□ 0.33
Hmgn1P18608 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn1P18608 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn1P18608 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.14■□□□□ 0.33
Hmgn1P18608 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgn1P18608 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.13■□□□□ 0.33
Hmgn1P18608 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn1P18608 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Hmgn1P18608 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Hmgn1P18608 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn1P18608 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn1P18608 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn1P18608 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.1■□□□□ 0.33
Hmgn1P18608 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn1P18608 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmgn1P18608 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.09■□□□□ 0.33
Hmgn1P18608 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Hmgn1P18608 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Hmgn1P18608 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn1P18608 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn1P18608 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn1P18608 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn1P18608 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgn1P18608 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn1P18608 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.08■□□□□ 0.32
Hmgn1P18608 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hmgn1P18608 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.08■□□□□ 0.32
Hmgn1P18608 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms