Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.04■□□□□ -0
Cdx1P18111 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cdx1P18111 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdx1P18111 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.04■□□□□ -0
Cdx1P18111 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.04■□□□□ -0
Cdx1P18111 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdx1P18111 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdx1P18111 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cdx1P18111 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.03■□□□□ -0
Cdx1P18111 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.03■□□□□ -0
Cdx1P18111 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cdx1P18111 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdx1P18111 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdx1P18111 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.03■□□□□ -0
Cdx1P18111 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cdx1P18111 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdx1P18111 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdx1P18111 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Gm9870-201ENSMUST00000063874 645 ntBASIC15.02■□□□□ -0
Cdx1P18111 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdx1P18111 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdx1P18111 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdx1P18111 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Cdx1P18111 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdx1P18111 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdx1P18111 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdx1P18111 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdx1P18111 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdx1P18111 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdx1P18111 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdx1P18111 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdx1P18111 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.99□□□□□ -0.01
Cdx1P18111 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdx1P18111 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdx1P18111 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdx1P18111 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.99□□□□□ -0.01
Cdx1P18111 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdx1P18111 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdx1P18111 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdx1P18111 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms