Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccl3P10855 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccl3P10855 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccl3P10855 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.63■□□□□ 0.25
Ccl3P10855 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccl3P10855 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccl3P10855 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccl3P10855 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccl3P10855 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccl3P10855 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.62■□□□□ 0.25
Ccl3P10855 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccl3P10855 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccl3P10855 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccl3P10855 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Mir1199-201ENSMUST00000117015 119 ntBASIC16.61■□□□□ 0.25
Ccl3P10855 Gm15565-201ENSMUST00000118890 427 ntBASIC16.61■□□□□ 0.25
Ccl3P10855 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccl3P10855 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Gm37055-201ENSMUST00000191866 133 ntBASIC16.61■□□□□ 0.25
Ccl3P10855 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Ccl3P10855 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccl3P10855 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccl3P10855 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccl3P10855 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Ccl3P10855 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccl3P10855 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.6■□□□□ 0.25
Ccl3P10855 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccl3P10855 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccl3P10855 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccl3P10855 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccl3P10855 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccl3P10855 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.59■□□□□ 0.25
Ccl3P10855 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccl3P10855 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccl3P10855 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccl3P10855 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Ccl3P10855 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccl3P10855 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.58■□□□□ 0.24
Ccl3P10855 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccl3P10855 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccl3P10855 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms