Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col4a2P08122 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.63■□□□□ 0.41
Col4a2P08122 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a2P08122 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.63■□□□□ 0.41
Col4a2P08122 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col4a2P08122 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a2P08122 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Col4a2P08122 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col4a2P08122 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col4a2P08122 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.62■□□□□ 0.41
Col4a2P08122 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.62■□□□□ 0.41
Col4a2P08122 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.62■□□□□ 0.41
Col4a2P08122 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Col4a2P08122 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a2P08122 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col4a2P08122 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.61■□□□□ 0.41
Col4a2P08122 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col4a2P08122 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a2P08122 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Gm11643-201ENSMUST00000119578 864 ntBASIC17.61■□□□□ 0.41
Col4a2P08122 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a2P08122 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.6■□□□□ 0.41
Col4a2P08122 Gm13158-201ENSMUST00000122007 736 ntBASIC17.6■□□□□ 0.41
Col4a2P08122 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.6■□□□□ 0.41
Col4a2P08122 Mir5122-201ENSMUST00000175004 89 ntBASIC17.6■□□□□ 0.41
Col4a2P08122 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.6■□□□□ 0.41
Col4a2P08122 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.6■□□□□ 0.41
Col4a2P08122 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.6■□□□□ 0.41
Col4a2P08122 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a2P08122 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.6■□□□□ 0.41
Col4a2P08122 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.59■□□□□ 0.41
Col4a2P08122 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a2P08122 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.59■□□□□ 0.41
Col4a2P08122 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a2P08122 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.59■□□□□ 0.41
Col4a2P08122 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col4a2P08122 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Col4a2P08122 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a2P08122 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a2P08122 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a2P08122 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.58■□□□□ 0.41
Col4a2P08122 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Col4a2P08122 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.58■□□□□ 0.41
Col4a2P08122 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a2P08122 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Col4a2P08122 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a2P08122 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a2P08122 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a2P08122 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a2P08122 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.58■□□□□ 0.4
Col4a2P08122 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a2P08122 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col4a2P08122 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a2P08122 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.57■□□□□ 0.4
Col4a2P08122 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.57■□□□□ 0.4
Col4a2P08122 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.57■□□□□ 0.4
Col4a2P08122 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.57■□□□□ 0.4
Col4a2P08122 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms