Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P04940 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.26■□□□□ 0.03
P04940 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04940 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.25■□□□□ 0.03
P04940 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.25■□□□□ 0.03
P04940 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.25■□□□□ 0.03
P04940 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04940 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04940 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
P04940 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.24■□□□□ 0.03
P04940 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04940 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.24■□□□□ 0.03
P04940 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.24■□□□□ 0.03
P04940 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.24■□□□□ 0.03
P04940 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.24■□□□□ 0.03
P04940 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04940 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.23■□□□□ 0.03
P04940 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.23■□□□□ 0.03
P04940 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.23■□□□□ 0.03
P04940 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04940 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.23■□□□□ 0.03
P04940 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04940 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.22■□□□□ 0.03
P04940 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.22■□□□□ 0.03
P04940 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
P04940 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04940 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04940 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04940 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04940 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.21■□□□□ 0.03
P04940 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04940 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04940 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
P04940 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
P04940 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04940 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
P04940 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
P04940 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
P04940 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04940 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04940 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
P04940 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04940 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
P04940 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.2■□□□□ 0.02
P04940 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.2■□□□□ 0.02
P04940 Gm42778-201ENSMUST00000199644 553 ntBASIC15.2■□□□□ 0.02
P04940 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
P04940 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.2■□□□□ 0.02
P04940 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04940 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.19■□□□□ 0.02
P04940 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.19■□□□□ 0.02
P04940 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.19■□□□□ 0.02
P04940 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P04940 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms