Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.88■□□□□ 0.45
Hcn1O88704 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.88■□□□□ 0.45
Hcn1O88704 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Hcn1O88704 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Hcn1O88704 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.87■□□□□ 0.45
Hcn1O88704 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.87■□□□□ 0.45
Hcn1O88704 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.87■□□□□ 0.45
Hcn1O88704 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Hcn1O88704 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.87■□□□□ 0.45
Hcn1O88704 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.87■□□□□ 0.45
Hcn1O88704 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn1O88704 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.86■□□□□ 0.45
Hcn1O88704 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hcn1O88704 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.86■□□□□ 0.45
Hcn1O88704 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Hcn1O88704 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.86■□□□□ 0.45
Hcn1O88704 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hcn1O88704 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.86■□□□□ 0.45
Hcn1O88704 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.85■□□□□ 0.45
Hcn1O88704 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.85■□□□□ 0.45
Hcn1O88704 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hcn1O88704 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hcn1O88704 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Hcn1O88704 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
Hcn1O88704 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.84■□□□□ 0.45
Hcn1O88704 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hcn1O88704 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Hcn1O88704 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn1O88704 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn1O88704 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn1O88704 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn1O88704 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hcn1O88704 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Hcn1O88704 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn1O88704 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn1O88704 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn1O88704 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Hcn1O88704 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hcn1O88704 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.82■□□□□ 0.44
Hcn1O88704 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.82■□□□□ 0.44
Hcn1O88704 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hcn1O88704 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hcn1O88704 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hcn1O88704 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms