Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf17O88472 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.46■□□□□ 0.38
Tnfrsf17O88472 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Gm9103-201ENSMUST00000119371 405 ntBASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.45■□□□□ 0.38
Tnfrsf17O88472 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf17O88472 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Gm6345-202ENSMUST00000180900 204 ntBASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Gm33142-201ENSMUST00000193913 867 ntBASIC17.44■□□□□ 0.38
Tnfrsf17O88472 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.44■□□□□ 0.38
Tnfrsf17O88472 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf17O88472 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Gm11927-201ENSMUST00000118472 759 ntBASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf17O88472 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf17O88472 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Gm43183-201ENSMUST00000200632 547 ntBASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf17O88472 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Gm10013-201ENSMUST00000106074 672 ntBASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Ank2-226ENSMUST00000189368 339 ntBASIC17.4■□□□□ 0.38
Tnfrsf17O88472 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms