Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1hO88427 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1hO88427 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1hO88427 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacna1hO88427 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1hO88427 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cacna1hO88427 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.36■□□□□ 0.53
Cacna1hO88427 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1hO88427 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.35■□□□□ 0.53
Cacna1hO88427 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1hO88427 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cacna1hO88427 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1hO88427 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1hO88427 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1hO88427 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1hO88427 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1hO88427 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.35■□□□□ 0.53
Cacna1hO88427 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Gm42545-201ENSMUST00000202755 922 ntBASIC18.34■□□□□ 0.53
Cacna1hO88427 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.34■□□□□ 0.53
Cacna1hO88427 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cacna1hO88427 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1hO88427 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1hO88427 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cacna1hO88427 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1hO88427 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Cacna1hO88427 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1hO88427 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1hO88427 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1hO88427 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1hO88427 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1hO88427 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1hO88427 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1hO88427 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.33■□□□□ 0.52
Cacna1hO88427 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1hO88427 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1hO88427 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.32■□□□□ 0.52
Cacna1hO88427 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacna1hO88427 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1hO88427 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacna1hO88427 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1hO88427 Gm17807-201ENSMUST00000186869 298 ntBASIC18.31■□□□□ 0.52
Cacna1hO88427 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacna1hO88427 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1hO88427 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1hO88427 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1hO88427 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1hO88427 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.3■□□□□ 0.52
Cacna1hO88427 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacna1hO88427 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.3■□□□□ 0.52
Cacna1hO88427 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1hO88427 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1hO88427 Gm15375-201ENSMUST00000119510 849 ntBASIC18.3■□□□□ 0.52
Cacna1hO88427 Gm6443-201ENSMUST00000203599 874 ntBASIC18.3■□□□□ 0.52
Cacna1hO88427 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1hO88427 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1hO88427 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1hO88427 Mzt1-203ENSMUST00000227948 952 ntBASIC18.29■□□□□ 0.52
Cacna1hO88427 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1hO88427 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1hO88427 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1hO88427 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.29■□□□□ 0.52
Cacna1hO88427 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.29■□□□□ 0.52
Cacna1hO88427 Gm27704-201ENSMUST00000185094 107 ntBASIC18.28■□□□□ 0.52
Cacna1hO88427 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.28■□□□□ 0.52
Cacna1hO88427 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Gm18669-201ENSMUST00000216049 778 ntBASIC18.28■□□□□ 0.52
Cacna1hO88427 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cacna1hO88427 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.28■□□□□ 0.52
Cacna1hO88427 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms