Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.86■□□□□ 0.45
Tgfbr3O88393 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tgfbr3O88393 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Tgfbr3O88393 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.85■□□□□ 0.45
Tgfbr3O88393 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tgfbr3O88393 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.84■□□□□ 0.45
Tgfbr3O88393 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.84■□□□□ 0.45
Tgfbr3O88393 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tgfbr3O88393 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tgfbr3O88393 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tgfbr3O88393 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tgfbr3O88393 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Tgfbr3O88393 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tgfbr3O88393 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.83■□□□□ 0.44
Tgfbr3O88393 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tgfbr3O88393 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Gm15378-201ENSMUST00000121894 207 ntBASIC17.82■□□□□ 0.44
Tgfbr3O88393 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tgfbr3O88393 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.81■□□□□ 0.44
Tgfbr3O88393 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.81■□□□□ 0.44
Tgfbr3O88393 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.81■□□□□ 0.44
Tgfbr3O88393 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.81■□□□□ 0.44
Tgfbr3O88393 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.81■□□□□ 0.44
Tgfbr3O88393 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tgfbr3O88393 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Gm13158-201ENSMUST00000122007 736 ntBASIC17.8■□□□□ 0.44
Tgfbr3O88393 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.8■□□□□ 0.44
Tgfbr3O88393 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tgfbr3O88393 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms