Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Gm8495-201ENSMUST00000188740 694 ntBASIC15.18■□□□□ 0.02
Nkx2-8O70584 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.18■□□□□ 0.02
Nkx2-8O70584 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.18■□□□□ 0.02
Nkx2-8O70584 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.18■□□□□ 0.02
Nkx2-8O70584 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-8O70584 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.17■□□□□ 0.02
Nkx2-8O70584 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.17■□□□□ 0.02
Nkx2-8O70584 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-8O70584 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.16■□□□□ 0.02
Nkx2-8O70584 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.16■□□□□ 0.02
Nkx2-8O70584 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-8O70584 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Gm5874-201ENSMUST00000096101 508 ntBASIC15.15■□□□□ 0.02
Nkx2-8O70584 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-8O70584 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.14■□□□□ 0.01
Nkx2-8O70584 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-8O70584 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-8O70584 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.13■□□□□ 0.01
Nkx2-8O70584 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms