Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ChkaO54804 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.92■□□□□ 0.62
ChkaO54804 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ChkaO54804 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.92■□□□□ 0.62
ChkaO54804 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
ChkaO54804 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ChkaO54804 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ChkaO54804 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.91■□□□□ 0.62
ChkaO54804 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
ChkaO54804 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ChkaO54804 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ChkaO54804 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.9■□□□□ 0.62
ChkaO54804 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.9■□□□□ 0.62
ChkaO54804 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ChkaO54804 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkaO54804 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.89■□□□□ 0.62
ChkaO54804 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkaO54804 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ChkaO54804 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.89■□□□□ 0.61
ChkaO54804 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.89■□□□□ 0.61
ChkaO54804 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ChkaO54804 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ChkaO54804 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.88■□□□□ 0.61
ChkaO54804 Gm38205-201ENSMUST00000192243 258 ntBASIC18.88■□□□□ 0.61
ChkaO54804 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.88■□□□□ 0.61
ChkaO54804 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.88■□□□□ 0.61
ChkaO54804 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.88■□□□□ 0.61
ChkaO54804 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ChkaO54804 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.87■□□□□ 0.61
ChkaO54804 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ChkaO54804 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.87■□□□□ 0.61
ChkaO54804 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Grk6-206ENSMUST00000224995 2971 ntBASIC18.87■□□□□ 0.61
ChkaO54804 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ChkaO54804 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ChkaO54804 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
ChkaO54804 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ChkaO54804 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ChkaO54804 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms