Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
FxnO35943 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FxnO35943 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.36■□□□□ 0.37
FxnO35943 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.36■□□□□ 0.37
FxnO35943 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FxnO35943 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
FxnO35943 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FxnO35943 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.35■□□□□ 0.37
FxnO35943 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.35■□□□□ 0.37
FxnO35943 Gm43060-201ENSMUST00000200621 289 ntBASIC17.35■□□□□ 0.37
FxnO35943 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FxnO35943 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.34■□□□□ 0.37
FxnO35943 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.34■□□□□ 0.37
FxnO35943 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Gm40848-201ENSMUST00000221998 324 ntBASIC17.34■□□□□ 0.37
FxnO35943 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FxnO35943 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
FxnO35943 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
FxnO35943 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FxnO35943 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FxnO35943 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FxnO35943 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.33■□□□□ 0.36
FxnO35943 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.33■□□□□ 0.36
FxnO35943 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FxnO35943 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FxnO35943 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FxnO35943 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.32■□□□□ 0.36
FxnO35943 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.32■□□□□ 0.36
FxnO35943 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.32■□□□□ 0.36
FxnO35943 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FxnO35943 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FxnO35943 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.31■□□□□ 0.36
FxnO35943 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FxnO35943 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.31■□□□□ 0.36
FxnO35943 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.31■□□□□ 0.36
FxnO35943 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FxnO35943 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.31■□□□□ 0.36
FxnO35943 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms