Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1i3O35627 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1i3O35627 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.17■□□□□ 0.82
Nr1i3O35627 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nr1i3O35627 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nr1i3O35627 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.16■□□□□ 0.82
Nr1i3O35627 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nr1i3O35627 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1i3O35627 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.15■□□□□ 0.82
Nr1i3O35627 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nr1i3O35627 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1i3O35627 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.14■□□□□ 0.82
Nr1i3O35627 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nr1i3O35627 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.14■□□□□ 0.81
Nr1i3O35627 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.14■□□□□ 0.81
Nr1i3O35627 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nr1i3O35627 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1i3O35627 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nr1i3O35627 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nr1i3O35627 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.13■□□□□ 0.81
Nr1i3O35627 Gm43017-201ENSMUST00000198296 752 ntBASIC20.13■□□□□ 0.81
Nr1i3O35627 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nr1i3O35627 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.13■□□□□ 0.81
Nr1i3O35627 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nr1i3O35627 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1i3O35627 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.12■□□□□ 0.81
Nr1i3O35627 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.12■□□□□ 0.81
Nr1i3O35627 Gm38205-201ENSMUST00000192243 258 ntBASIC20.12■□□□□ 0.81
Nr1i3O35627 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1i3O35627 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Nr1i3O35627 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.11■□□□□ 0.81
Nr1i3O35627 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nr1i3O35627 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.11■□□□□ 0.81
Nr1i3O35627 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1i3O35627 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Nr1i3O35627 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.1■□□□□ 0.81
Nr1i3O35627 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nr1i3O35627 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1i3O35627 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms