Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Capn1O35350 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.28■□□□□ 0.36
Capn1O35350 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.28■□□□□ 0.36
Capn1O35350 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Capn1O35350 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Capn1O35350 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Capn1O35350 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Capn1O35350 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capn1O35350 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capn1O35350 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capn1O35350 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Capn1O35350 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Capn1O35350 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.27■□□□□ 0.36
Capn1O35350 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.27■□□□□ 0.36
Capn1O35350 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Capn1O35350 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.27■□□□□ 0.35
Capn1O35350 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capn1O35350 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capn1O35350 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capn1O35350 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Capn1O35350 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Capn1O35350 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Gm13534-201ENSMUST00000121169 513 ntBASIC17.26■□□□□ 0.35
Capn1O35350 Gm12441-201ENSMUST00000121806 588 ntBASIC17.26■□□□□ 0.35
Capn1O35350 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Capn1O35350 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.26■□□□□ 0.35
Capn1O35350 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.26■□□□□ 0.35
Capn1O35350 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Capn1O35350 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.26■□□□□ 0.35
Capn1O35350 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Capn1O35350 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.25■□□□□ 0.35
Capn1O35350 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.25■□□□□ 0.35
Capn1O35350 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.25■□□□□ 0.35
Capn1O35350 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Capn1O35350 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.24■□□□□ 0.35
Capn1O35350 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Capn1O35350 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Capn1O35350 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Gm4968-201ENSMUST00000071458 858 ntBASIC17.24■□□□□ 0.35
Capn1O35350 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.24■□□□□ 0.35
Capn1O35350 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Capn1O35350 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.23■□□□□ 0.35
Capn1O35350 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.23■□□□□ 0.35
Capn1O35350 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.23■□□□□ 0.35
Capn1O35350 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.23■□□□□ 0.35
Capn1O35350 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Gm13148-201ENSMUST00000118892 745 ntBASIC17.23■□□□□ 0.35
Capn1O35350 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Capn1O35350 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.23■□□□□ 0.35
Capn1O35350 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Capn1O35350 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Capn1O35350 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Capn1O35350 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capn1O35350 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Capn1O35350 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.22■□□□□ 0.35
Capn1O35350 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Capn1O35350 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capn1O35350 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms