Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.46■□□□□ 0.39
Scarb2O35114 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.46■□□□□ 0.39
Scarb2O35114 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb2O35114 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scarb2O35114 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scarb2O35114 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.45■□□□□ 0.38
Scarb2O35114 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Scarb2O35114 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb2O35114 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Scarb2O35114 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scarb2O35114 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.44■□□□□ 0.38
Scarb2O35114 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.44■□□□□ 0.38
Scarb2O35114 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.44■□□□□ 0.38
Scarb2O35114 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.44■□□□□ 0.38
Scarb2O35114 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scarb2O35114 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.44■□□□□ 0.38
Scarb2O35114 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.44■□□□□ 0.38
Scarb2O35114 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Scarb2O35114 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb2O35114 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.43■□□□□ 0.38
Scarb2O35114 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scarb2O35114 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.43■□□□□ 0.38
Scarb2O35114 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.43■□□□□ 0.38
Scarb2O35114 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb2O35114 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Scarb2O35114 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scarb2O35114 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.42■□□□□ 0.38
Scarb2O35114 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb2O35114 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scarb2O35114 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb2O35114 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb2O35114 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scarb2O35114 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.41■□□□□ 0.38
Scarb2O35114 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Scarb2O35114 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.41■□□□□ 0.38
Scarb2O35114 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scarb2O35114 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scarb2O35114 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms