Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm30025-201ENSMUST00000218555 728 ntBASIC18.92■□□□□ 0.62
AlyrefO08583 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AlyrefO08583 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AlyrefO08583 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AlyrefO08583 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AlyrefO08583 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AlyrefO08583 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AlyrefO08583 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Gm6345-202ENSMUST00000180900 204 ntBASIC18.91■□□□□ 0.62
AlyrefO08583 Gm17971-201ENSMUST00000190239 806 ntBASIC18.91■□□□□ 0.62
AlyrefO08583 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AlyrefO08583 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.91■□□□□ 0.62
AlyrefO08583 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.9■□□□□ 0.62
AlyrefO08583 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.9■□□□□ 0.62
AlyrefO08583 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AlyrefO08583 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.9■□□□□ 0.62
AlyrefO08583 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AlyrefO08583 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
AlyrefO08583 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.89■□□□□ 0.61
AlyrefO08583 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
AlyrefO08583 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AlyrefO08583 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
AlyrefO08583 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AlyrefO08583 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.88■□□□□ 0.61
AlyrefO08583 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AlyrefO08583 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 AA414768-201ENSMUST00000121924 1257 ntBASIC18.87■□□□□ 0.61
AlyrefO08583 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.87■□□□□ 0.61
AlyrefO08583 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.87■□□□□ 0.61
AlyrefO08583 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AlyrefO08583 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AlyrefO08583 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.86■□□□□ 0.61
AlyrefO08583 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
AlyrefO08583 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AlyrefO08583 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Gm10013-201ENSMUST00000106074 672 ntBASIC18.85■□□□□ 0.61
AlyrefO08583 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AlyrefO08583 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
AlyrefO08583 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.84■□□□□ 0.61
AlyrefO08583 Gm43514-201ENSMUST00000198852 424 ntBASIC18.84■□□□□ 0.61
AlyrefO08583 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AlyrefO08583 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AlyrefO08583 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
AlyrefO08583 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
AlyrefO08583 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Gm13559-201ENSMUST00000120476 863 ntBASIC18.83■□□□□ 0.6
AlyrefO08583 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AlyrefO08583 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
AlyrefO08583 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms