Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Gm9959-201ENSMUST00000068277 390 ntBASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shisa8J3QNX5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shisa8J3QNX5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Shisa8J3QNX5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shisa8J3QNX5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shisa8J3QNX5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shisa8J3QNX5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Gm5812-201ENSMUST00000061073 957 ntBASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shisa8J3QNX5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms