Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh9F8VPK8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh9F8VPK8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh9F8VPK8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh9F8VPK8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh9F8VPK8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh9F8VPK8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.14■□□□□ 0.66
Pcdh9F8VPK8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Gm26833-201ENSMUST00000180899 440 ntBASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms