Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Gm25016-201ENSMUST00000158399 131 ntBASIC19■□□□□ 0.63
Col6a3E9PWQ3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19■□□□□ 0.63
Col6a3E9PWQ3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col6a3E9PWQ3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a3E9PWQ3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col6a3E9PWQ3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.99■□□□□ 0.63
Col6a3E9PWQ3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col6a3E9PWQ3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm18958-201ENSMUST00000174258 762 ntBASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a3E9PWQ3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a3E9PWQ3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col6a3E9PWQ3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Gm5186-201ENSMUST00000218781 920 ntBASIC18.94■□□□□ 0.62
Col6a3E9PWQ3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a3E9PWQ3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms