Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28043E0CXC2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28043E0CXC2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.72■□□□□ 0.59
Gm28043E0CXC2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm28043E0CXC2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28043E0CXC2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28043E0CXC2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Smad6-203ENSMUST00000179458 273 ntBASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm28043E0CXC2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms