Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.23■□□□□ 0.83
Ptchd4B9EKX1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptchd4B9EKX1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptchd4B9EKX1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Gm5643-201ENSMUST00000117081 966 ntBASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Ptchd4B9EKX1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptchd4B9EKX1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Gm11249-201ENSMUST00000117071 859 ntBASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptchd4B9EKX1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ptchd4B9EKX1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ptchd4B9EKX1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ptchd4B9EKX1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms