Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a6B1AVK5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Gm9987-201ENSMUST00000069768 567 ntBASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.55■□□□□ 0.72
Col4a6B1AVK5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a6B1AVK5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Gm10231-201ENSMUST00000181584 441 ntBASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Gm10175-202ENSMUST00000208752 441 ntBASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Col4a6B1AVK5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a6B1AVK5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Col4a6B1AVK5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.52■□□□□ 0.71
Col4a6B1AVK5 Mtag2-201ENSMUST00000058665 714 ntBASIC19.52■□□□□ 0.71
Col4a6B1AVK5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.52■□□□□ 0.71
Col4a6B1AVK5 Zfp783-201ENSMUST00000095946 670 ntBASIC19.52■□□□□ 0.71
Col4a6B1AVK5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Gm21814-202ENSMUST00000203277 873 ntBASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a6B1AVK5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Flg-201ENSMUST00000050758 1488 ntBASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a6B1AVK5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Gm6433-201ENSMUST00000118634 875 ntBASIC19.49■□□□□ 0.71
Col4a6B1AVK5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col4a6B1AVK5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms