Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.74■□□□□ 0.91
Herc3A6H6S0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herc3A6H6S0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
Herc3A6H6S0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herc3A6H6S0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
Herc3A6H6S0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.72■□□□□ 0.91
Herc3A6H6S0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herc3A6H6S0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.71■□□□□ 0.91
Herc3A6H6S0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.71■□□□□ 0.91
Herc3A6H6S0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herc3A6H6S0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Gm13234-201ENSMUST00000120010 747 ntBASIC20.7■□□□□ 0.9
Herc3A6H6S0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.7■□□□□ 0.9
Herc3A6H6S0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.7■□□□□ 0.9
Herc3A6H6S0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Herc3A6H6S0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Herc3A6H6S0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herc3A6H6S0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms