Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt28A6BLY7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt28A6BLY7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Krt28A6BLY7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Krt28A6BLY7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt28A6BLY7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Krt28A6BLY7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.88■□□□□ 0.93
Krt28A6BLY7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.88■□□□□ 0.93
Krt28A6BLY7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt28A6BLY7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.87■□□□□ 0.93
Krt28A6BLY7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Krt28A6BLY7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt28A6BLY7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Krt28A6BLY7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Gm21814-202ENSMUST00000203277 873 ntBASIC20.86■□□□□ 0.93
Krt28A6BLY7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.86■□□□□ 0.93
Krt28A6BLY7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Krt28A6BLY7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt28A6BLY7 Gm6659-201ENSMUST00000174752 547 ntBASIC20.85■□□□□ 0.93
Krt28A6BLY7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Krt28A6BLY7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt28A6BLY7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt28A6BLY7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt28A6BLY7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt28A6BLY7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt28A6BLY7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt28A6BLY7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt28A6BLY7 Gm43183-201ENSMUST00000200632 547 ntBASIC20.83■□□□□ 0.93
Krt28A6BLY7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.83■□□□□ 0.93
Krt28A6BLY7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.83■□□□□ 0.92
Krt28A6BLY7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt28A6BLY7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt28A6BLY7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt28A6BLY7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Krt28A6BLY7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.82■□□□□ 0.92
Krt28A6BLY7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt28A6BLY7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms