Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3854A0A1B0GSS6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm18666-201ENSMUST00000190039 958 ntBASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3854A0A1B0GSS6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 Gm22325-201ENSMUST00000158904 308 ntBASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3854A0A1B0GSS6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3854A0A1B0GSS6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3854A0A1B0GSS6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3854A0A1B0GSS6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm3854A0A1B0GSS6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms