Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcna-ps2A0A140T8V5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Gm27801-201ENSMUST00000184174 223 ntBASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcna-ps2A0A140T8V5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcna-ps2A0A140T8V5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Pcna-ps2A0A140T8V5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcna-ps2A0A140T8V5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcna-ps2A0A140T8V5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms