Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-5A0A140T8M6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-5A0A140T8M6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Golgb1-201ENSMUST00000023534 498 ntBASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-5A0A140T8M6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm10209-201ENSMUST00000203397 1607 ntBASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms