Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27454-201ENSMUST00000185090 204 ntBASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6139-201ENSMUST00000079261 882 ntBASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Grk6-206ENSMUST00000224995 2971 ntBASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms