Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9d-4A0A0G2JG37 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Gm43530-201ENSMUST00000195920 274 ntBASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-4A0A0G2JG37 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9d-4A0A0G2JG37 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9d-4A0A0G2JG37 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Trav9d-4A0A0G2JG37 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-4A0A0G2JG37 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm40881-201ENSMUST00000223397 166 ntBASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-4A0A0G2JG37 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Etf1-202ENSMUST00000180351 108 ntBASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9d-4A0A0G2JG37 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms