Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-4A0A0G2JG01 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-4A0A0G2JG01 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav13n-4A0A0G2JG01 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-4A0A0G2JG01 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm10602-201ENSMUST00000098239 609 ntBASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-4A0A0G2JG01 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm27011-201ENSMUST00000182352 972 ntBASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-4A0A0G2JG01 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms