Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm43213-201ENSMUST00000151866 1790 ntBASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Igkv8-27A0A0G2JF28 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 AA386476-201ENSMUST00000098781 1665 ntBASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv8-27A0A0G2JF28 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv8-27A0A0G2JF28 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv8-27A0A0G2JF28 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv8-27A0A0G2JF28 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Igkv8-27A0A0G2JF28 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv8-27A0A0G2JF28 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Gm11687-201ENSMUST00000118911 886 ntBASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv8-27A0A0G2JF28 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Gm5828-201ENSMUST00000071842 1860 ntBASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv8-27A0A0G2JF28 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv8-27A0A0G2JF28 Gm7856-201ENSMUST00000117514 1493 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms