Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm43173-201ENSMUST00000202246 593 ntBASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav21-dv12A0A075B6C4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm45417-201ENSMUST00000209533 758 ntBASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav21-dv12A0A075B6C4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trav21-dv12A0A075B6C4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav21-dv12A0A075B6C4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm40848-201ENSMUST00000221998 324 ntBASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm6139-201ENSMUST00000079261 882 ntBASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 BC021767-201ENSMUST00000126387 1716 ntBASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav21-dv12A0A075B6C4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms