Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm7417-201ENSMUST00000192950 473 ntBASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-5A0A075B6B9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-5A0A075B6B9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-5A0A075B6B9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-5A0A075B6B9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms