Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-4A0A075B654 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav3-4A0A075B654 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Gm7432-201ENSMUST00000210343 879 ntBASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-4A0A075B654 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Gm11599-201ENSMUST00000118720 878 ntBASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-4A0A075B654 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gm8503-201ENSMUST00000118131 455 ntBASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-4A0A075B654 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-4A0A075B654 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms